Stem-loop xla-mir-125a

Accession

MI0038238

Description

Xenopus laevis xla-mir-125a precursor miRNA

Literature search

4 open access papers mention xla-mir-125a
(6 sentences)

Sequence

338504 reads, 8678.0 reads per million, 18 experiments

UCCCUGAGACCCUUAACCUGUGAGgaagacauaugucACAGGUGAGGUUCUGAGGAGCU
..(((.(((.(((((.(((((((.(........).)))))))))))).))).)))....

Structure

--UC   G   C     A       G aag 
    CCU AGA CCUUA CCUGUGA g   a
    ||| ||| ||||| ||||||| |    
    GGA UCU GGAGU GGACAcu u   c
UCGA   G   U     -       g aua 

Annotation confidence High

Genome context

chr7L: 112997294-112997352 [-]

Mature xla-miR-125a-5p

• Accession: MIMAT0046431
• Description: Xenopus laevis xla-miR-125a-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUUAACCUGUGAG - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-125a-3p

• Accession: MIMAT0046432
• Description: Xenopus laevis xla-miR-125a-3p mature miRNA
• Sequence: 38 - ACAGGUGAGGUUCUGAGGAGCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38