Stem-loop xla-mir-10a

Accession

MI0038233

Description

Xenopus laevis xla-mir-10a precursor miRNA

Literature search

1 open access papers mention xla-mir-10a
(2 sentences)

Sequence

UACCCUGUAGAUCCGAAUUUGUGUgagcgcaaucauaucACAAAUUCGUGUCUGGGGGGAUA
..((((.(((((.(((((((((((((......)))...)))))))))).))))).))))...

Structure

-UA    G     C          ---   gc 
   CCCU UAGAU CGAAUUUGUG   Uga  g
   |||| ||||| ||||||||||   |||   
   GGGG GUCUG GCUUAAACAc   acu  c
AUA    G     U          uau   aa 

Annotation confidence Low

Genome context

chr9_10L: 3499313-3499374 [-]

Mature xla-miR-10a-5p

• Accession: MIMAT0046422
• Description: Xenopus laevis xla-miR-10a-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAUCCGAAUUUGUGU - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-10a-3p

• Accession: MIMAT0046423
• Description: Xenopus laevis xla-miR-10a-3p mature miRNA
• Sequence: 40 - ACAAAUUCGUGUCUGGGGGGAUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38