Stem-loop xla-mir-375-1

Accession

MI0038328

Description

Xenopus laevis xla-mir-375-1 precursor miRNA

Literature search

6 open access papers mention xla-mir-375-1
(45 sentences)

Sequence

1924 reads, 73.0 reads per million, 17 experiments

GACGUCGAGCCAGACGUGCAAUGCuuuguaacaacguUUUGUUCGUUCGGCUCGCGUUAA
((((.((((((.((((.((((.((.(((...))).)).)))).)))).))))))))))..

Structure

--    U      A    U    U  u   u 
  GACG CGAGCC GACG GCAA GC uug  
  |||| |||||| |||| |||| || ||| a
  UUGC GCUCGG UUGC UGUU ug aac  
AA    -      C    U    U  c   a 

Annotation confidence Not enough data

Genome context

chr9_10L: 53094726-53094785 [+]

Mature xla-miR-375-1-5p

• Accession: MIMAT0046590
• Description: Xenopus laevis xla-miR-375-1-5p mature miRNA
• Sequence: 1 - GACGUCGAGCCAGACGUGCAAUGC - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-375-1-3p

• Accession: MIMAT0046591
• Description: Xenopus laevis xla-miR-375-1-3p mature miRNA
• Sequence: 38 - UUUGUUCGUUCGGCUCGCGUUAA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38