Stem-loop xla-mir-217

Accession

MI0038299

Description

Xenopus laevis xla-mir-217 precursor miRNA

Sequence

ACUGCAUCAGGAACUGAUUGGAUcccagggagcagCCAUCAGUUCCUAAUGCAUUGC
..(((((.((((((((((.((.(((...)))....)))))))))))).)))))....

Structure

--AC     C          U  ---A   c 
    UGCAU AGGAACUGAU GG    Ucc  
    ||||| |||||||||| ||    ||| a
    ACGUA UCCUUGACUA CC    agg  
CGUU     A          -  gacg   g 

Annotation confidence Low

Genome context

chr5S: 27733495-27733551 [+]

Mature xla-miR-217-5p

• Accession: MIMAT0046538
• Description: Xenopus laevis xla-miR-217-5p mature miRNA
• Sequence: 1 - ACUGCAUCAGGAACUGAUUGGAU - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-217-3p

• Accession: MIMAT0046539
• Description: Xenopus laevis xla-miR-217-3p mature miRNA
• Sequence: 36 - CCAUCAGUUCCUAAUGCAUUGC - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38