Stem-loop xla-mir-206-1

Accession

MI0038292

Description

Xenopus laevis xla-mir-206-1 precursor miRNA

Literature search

6 open access papers mention xla-mir-206-1
(7 sentences)

Sequence

1217 reads, 51.0 reads per million, 14 experiments

ACAUGCUUCUUUAUAUACCCAUAugaacuacauuguuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((...((......))))))).))))))))))))))))..

Structure

--                AC     uga  ua 
  ACAUGCUUCUUUAUAU  CCAUA   ac  c
  ||||||||||||||||  |||||   ||   
  UGUGUGAAGGAAUGUA  GGUau   ug  a
GG                -A     ---  uu 

Annotation confidence Not enough data

Genome context

chr5L: 152010995-152011054 [+]

Mature xla-miR-206-1-5p

• Accession: MIMAT0046526
• Description: Xenopus laevis xla-miR-206-1-5p mature miRNA
• Sequence: 1 - ACAUGCUUCUUUAUAUACCCAUA - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-206-1-3p

• Accession: MIMAT0046527
• Description: Xenopus laevis xla-miR-206-1-3p mature miRNA
• Sequence: 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38