Stem-loop cpo-let-7g

Accession

MI0038549

Description

Cavia porcellus cpo-let-7g precursor miRNA

Literature search

2 open access papers mention cpo-let-7g
(5 sentences)

Sequence

95186 reads, 11250.0 reads per million, 9 experiments

UGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguauaggagauaaCUGUACAGGCCACUGCCUUGCc
.((((((((.((((((((((((.....((((...(((((....)))))...)))))))))))))))).))))))))...

Structure

--U        A            ugagg    aug     a 
   GAGGUAGU GUUUGUACAGUU     gucu   auacc c
   |||||||| ||||||||||||     ||||   |||||  
   UUCCGUCA CGGACAUGUCaa     uaga   uaugg c
cCG        C            -----    gga     c 

Annotation confidence High

Genome context

DS562863.1: 27229787-27229865 [-]

Mature cpo-let-7g-5p

• Accession: MIMAT0046831
• Description: Cavia porcellus cpo-let-7g-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUACAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-let-7g-3p

• Accession: MIMAT0046832
• Description: Cavia porcellus cpo-let-7g-3p mature miRNA
• Sequence: 58 - CUGUACAGGCCACUGCCUUGC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344