Stem-loop cpo-mir-10a

Accession

MI0038559

Description

Cavia porcellus cpo-mir-10a precursor miRNA

Literature search

2 open access papers mention cpo-mir-10a
(3 sentences)

Sequence

27448 reads, 1111.0 reads per million, 5 experiments

UACCCUGUAGGUCCGAAUUUGUguaaggaauuuuauggucaCAAAUUCGUAUCUAGGGGAAUa
...(((.(((((.((((((((((................)))))))))).))))).)))....

Structure

-UAC   G     C          uaaggaa 
    CCU UAGGU CGAAUUUGUg       u
    ||| ||||| ||||||||||        
    GGG AUCUA GCUUAAACac       u
aUAA   G     U          ugguauu 

Annotation confidence High

Genome context

DS562908.1: 8675059-8675121 [+]

Mature cpo-miR-10a-5p

• Accession: MIMAT0046845
• Description: Cavia porcellus cpo-miR-10a-5p mature miRNA
• Sequence: 1 - UACCCUGUAGGUCCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-10a-3p

• Accession: MIMAT0046846
• Description: Cavia porcellus cpo-miR-10a-3p mature miRNA
• Sequence: 42 - CAAAUUCGUAUCUAGGGGAAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344