Stem-loop cpo-mir-10b

Accession

MI0038560

Description

Cavia porcellus cpo-mir-10b precursor miRNA

Literature search

1 open access papers mention cpo-mir-10b
(11 sentences)

Sequence

2395291 reads, 51506.0 reads per million, 9 experiments

UACCCUGUAGAACCGAAUUUGUgugguauccacauagucACAGAUUCGAUUCUAGGGGAAUa
...(((.(((((.((((((((((.(.(((....))).))))))))))).))))).)))....

Structure

-UAC   G     C          u g   c 
    CCU UAGAA CGAAUUUGUg g uau c
    ||| ||||| |||||||||| | |||  
    GGG AUCUU GCUUAGACAc u aua a
aUAA   G     A          - g   c 

Annotation confidence Medium

Genome context

DS562858.1: 14161469-14161530 [-]

Mature cpo-miR-10b-5p

• Accession: MIMAT0046847
• Description: Cavia porcellus cpo-miR-10b-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-10b-3p

• Accession: MIMAT0046848
• Description: Cavia porcellus cpo-miR-10b-3p mature miRNA
• Sequence: 40 - ACAGAUUCGAUUCUAGGGGAAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344