Stem-loop cpo-mir-16b

Accession

MI0038564

Description

Cavia porcellus cpo-mir-16b precursor miRNA

Sequence

UAGCAGCACGUAAAUAUUGGCGUagugaaauaaauauuaaacACCAAUAUUAUUGUGCUGCUUUA
.(((((((((..((((((((.((.................)).))))))))..)))))))))...

Structure

--U         UA        C  agugaaa 
   AGCAGCACG  AAUAUUGG GU       u
   |||||||||  |||||||| ||       a
   UCGUCGUGU  UUAUAACC ca       a
AUU         UA        A  aauuaua 

Annotation confidence Not enough data

Genome context

DS562863.1: 57379204-57379268 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-16b

Mature cpo-miR-16b-5p

• Accession: MIMAT0046855
• Description: Cavia porcellus cpo-miR-16b-5p mature miRNA
• Sequence: 1 - UAGCAGCACGUAAAUAUUGGCGU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-16b-3p

• Accession: MIMAT0046856
• Description: Cavia porcellus cpo-miR-16b-3p mature miRNA
• Sequence: 43 - ACCAAUAUUAUUGUGCUGCUUUA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344