Stem-loop cpo-mir-18b

Accession

MI0038567

Description

Cavia porcellus cpo-mir-18b precursor miRNA

Sequence

UAAGGUGCAUCUAGUGCAGUUAGugaagcagcuuagaaucuacUGCCCUAAAUGCCCCUUCUGGC
.((((.((((.(((.(((((.((................))))))).))).)))).)))).....

Structure

----U    U    C   U     U  ugaagca 
     AAGG GCAU UAG GCAGU AG       g
     |||| |||| ||| ||||| ||        
     UUCC CGUA AUC CGUca uc       c
CGGUC    C    A   C     -  uaagauu 

Annotation confidence Not enough data

Genome context

DS562983.1: 2512897-2512961 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cpo-mir-18b

Mature cpo-miR-18b-5p

• Accession: MIMAT0046861
• Description: Cavia porcellus cpo-miR-18b-5p mature miRNA
• Sequence: 1 - UAAGGUGCAUCUAGUGCAGUUAG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-18b-3p

• Accession: MIMAT0046862
• Description: Cavia porcellus cpo-miR-18b-3p mature miRNA
• Sequence: 44 - UGCCCUAAAUGCCCCUUCUGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344