Stem-loop cpo-mir-24-2

Accession

MI0038578

Description

Cavia porcellus cpo-mir-24-2 precursor miRNA

Literature search

1 open access papers mention cpo-mir-24-2
(14 sentences)

Sequence

29456 reads, 5117.0 reads per million, 9 experiments

gUACCUACUGAGCUGAAACACAGUUGauuugugcagacUGGCUCAGUUCAGCAGGAACAG
((.(((.(((((((((....(((((..........)))))..))))))))).))).))..

Structure

--  A   A         AACA     Gauu 
  gU CCU CUGAGCUGA    CAGUU    u
  || ||| |||||||||    |||||     
  CA GGA GACUUGACU    GUcag    g
GA  A   C         --CG     acgu 

Annotation confidence High

Genome context

DS562897.1: 12931984-12932043 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-24-2

Mature cpo-miR-24-2-5p

• Accession: MIMAT0046882
• Description: Cavia porcellus cpo-miR-24-2-5p mature miRNA
• Sequence: 2 - UACCUACUGAGCUGAAACACAGUUG - 26
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-24-3p

• Accession: MIMAT0046881
• Description: Cavia porcellus cpo-miR-24-3p mature miRNA
• Sequence: 39 - UGGCUCAGUUCAGCAGGAACAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344