Stem-loop cpo-mir-30e

Accession

MI0038595

Description

Cavia porcellus cpo-mir-30e precursor miRNA

Sequence

UGUAAACAUCCUUGACUGGAAGCUguaaaguguucagaggagCUUUCAGUCGGAUGUUUACAGC
(((((((((((..(((((((((((................))))))))))))))))))))))..

Structure

--           UU           guaaagu 
  UGUAAACAUCC  GACUGGAAGCU       g
  |||||||||||  |||||||||||        
  ACAUUUGUAGG  CUGACUUUCga       u
CG           --           ggagacu 

Annotation confidence Not enough data

Genome context

DS563035.1: 168140-168203 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-30e

Mature cpo-miR-30e-5p

• Accession: MIMAT0046912
• Description: Cavia porcellus cpo-miR-30e-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUUGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-30e-3p

• Accession: MIMAT0046913
• Description: Cavia porcellus cpo-miR-30e-3p mature miRNA
• Sequence: 43 - CUUUCAGUCGGAUGUUUACAGC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344