Stem-loop cpo-mir-34c

Accession

MI0038602

Description

Cavia porcellus cpo-mir-34c precursor miRNA

Sequence

AGGCAGUGUAGUUAGCUGAUUGCuaauaguaccAAUCACUAACCACACGGCCAGG
.(((.((((.(((((.((((((.((....)).))))))))))).)))).)))...

Structure

--A   A    A     C      C  a 
   GGC GUGU GUUAG UGAUUG ua u
   ||| |||| ||||| |||||| ||  
   CCG CACA CAAUC ACUAAc au a
GGA   G    C     -      c  g 

Annotation confidence Not enough data

Genome context

DS562874.1: 36239332-36239386 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-34c

Mature cpo-miR-34c-5p

• Accession: MIMAT0046926
• Description: Cavia porcellus cpo-miR-34c-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAGUUAGCUGAUUGC - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-34c-3p

• Accession: MIMAT0046927
• Description: Cavia porcellus cpo-miR-34c-3p mature miRNA
• Sequence: 34 - AAUCACUAACCACACGGCCAGG - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344