Stem-loop cpo-mir-99b

Accession

MI0038611

Description

Cavia porcellus cpo-mir-99b precursor miRNA

Sequence

CACCCGUAGAACCGACCUUGCGgggccuucgccacacaCAAGCUCGUGUCUGUGGGUCCG
.(((((((((..(((.((((.(((((....))).).).)))).)))..)))))))))...

Structure

--C         AC   C    C - -   c 
   ACCCGUAGA  CGA CUUG G g ggc u
   |||||||||  ||| |||| | | |||  
   UGGGUGUCU  GCU GAAC c c ccg u
GCC         GU   C    a a a   c 

Annotation confidence Not enough data

Genome context

DS562925.1: 6340368-6340427 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-99b

Mature cpo-miR-99b-5p

• Accession: MIMAT0046943
• Description: Cavia porcellus cpo-miR-99b-5p mature miRNA
• Sequence: 1 - CACCCGUAGAACCGACCUUGCG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-99b-3p

• Accession: MIMAT0046944
• Description: Cavia porcellus cpo-miR-99b-3p mature miRNA
• Sequence: 39 - CAAGCUCGUGUCUGUGGGUCCG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344