Stem-loop cpo-mir-101-1

Accession

MI0038613

Description

Cavia porcellus cpo-mir-101-1 precursor miRNA

Sequence

18593 reads, 3383.0 reads per million, 7 experiments

UCAGUUAUCACAGUGCUGAUGCUGugugcuccaaagGUACAGUACUGUGAUAACUGAAg
((((((((((((((((((.((((.((.....))..))))))))))))))))))))))..

Structure

--                  A    -G  u 
  UCAGUUAUCACAGUGCUG UGCU  ug g
  |||||||||||||||||| ||||  || c
  AGUCAAUAGUGUCAUGAC AUGg  ac u
gA                  -    aa  c 

Annotation confidence High

Genome context

DS562857.1: 67531172-67531230 [+]

Mature cpo-miR-101-5p

• Accession: MIMAT0046947
• Description: Cavia porcellus cpo-miR-101-5p mature miRNA
• Sequence: 1 - UCAGUUAUCACAGUGCUGAUGCUG - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-101-3p

• Accession: MIMAT0046948
• Description: Cavia porcellus cpo-miR-101-3p mature miRNA
• Sequence: 37 - GUACAGUACUGUGAUAACUGAA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344