Stem-loop cpo-mir-106b

Accession

MI0038619

Description

Cavia porcellus cpo-mir-106b precursor miRNA

Sequence

UAAAGUGCUGACAGUGCAGAUAgugguccucucugugcuaCCGCACUGUGGGUACUUGCUG
..(((((((.(((((((.....(((((.(.....).))))).))))))).)))))))....

Structure

--UA       G       AGAUA     c u 
    AAGUGCU ACAGUGC     guggu c c
    ||||||| |||||||     ||||| | u
    UUCAUGG UGUCACG     Caucg g c
GUCG       G       ----C     u u 

Annotation confidence Not enough data

Genome context

DS562885.1: 4035937-4035997 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-106b

Mature cpo-miR-106b-5p

• Accession: MIMAT0046957
• Description: Cavia porcellus cpo-miR-106b-5p mature miRNA
• Sequence: 1 - UAAAGUGCUGACAGUGCAGAUA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-106b-3p

• Accession: MIMAT0046958
• Description: Cavia porcellus cpo-miR-106b-3p mature miRNA
• Sequence: 41 - CCGCACUGUGGGUACUUGCUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344