Stem-loop cpo-mir-129-1

Accession

MI0038631

Description

Cavia porcellus cpo-mir-129-1 precursor miRNA

Sequence

492 reads, 52.0 reads per million, 3 experiments

CUUUUUGCGGUCUGGGCUUGCUGuuucuugcaacgguagucaggAAGCCCUUACCCCAAAAAGUAUc
(((((((.(((..((((((.(((...((......))....))).))))))..))).)))))))....

Structure

----       C   CU      G   -uuu  ug 
    CUUUUUG GGU  GGGCUU CUG    cu  c
    ||||||| |||  |||||| |||    ||   
    GAAAAAC CCA  CCCGAA gac    gg  a
cUAU       C   UU      g   ugau  ca 

Annotation confidence High

Genome context

DS562866.1: 48875085-48875151 [+]

Mature cpo-miR-129-5p

• Accession: MIMAT0046977
• Description: Cavia porcellus cpo-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGCUG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-129-3p

• Accession: MIMAT0046978
• Description: Cavia porcellus cpo-miR-129-3p mature miRNA
• Sequence: 45 - AAGCCCUUACCCCAAAAAGUAU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344