Stem-loop cpo-mir-134

Accession

MI0038639

Description

Cavia porcellus cpo-mir-134 precursor miRNA

Sequence

UGUGACUGGUUGACCAGAGGGGcaugcacuguguucaccCUGUGGGCCACCUAGUCACCAA
.((((((((.((.(((.((((((((.....))))...)))).)))..)).))))))))...

Structure

--U        U  -A   G    ---    g 
   GUGACUGG UG  CCA AGGG   Gcau c
   |||||||| ||  ||| ||||   |||| a
   CACUGAUC AC  GGU UCcc   ugug c
AAC        C  CG   G    acu    u 

Annotation confidence Not enough data

Genome context

DS562966.1: 1107399-1107459 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from cpo-mir-134

Mature cpo-miR-134-5p

• Accession: MIMAT0046990
• Description: Cavia porcellus cpo-miR-134-5p mature miRNA
• Sequence: 1 - UGUGACUGGUUGACCAGAGGGG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-134-3p

• Accession: MIMAT0046991
• Description: Cavia porcellus cpo-miR-134-3p mature miRNA
• Sequence: 40 - CUGUGGGCCACCUAGUCACCAA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344