miRBase entry: cpo-mir-141

Stem-loop cpo-mir-141

Accession

MI0038648

Description

Cavia porcellus cpo-mir-141 precursor miRNA

Sequence

CAUCUUCCAGCACAGUGUUGGUuggucuaauugugaagcuccUAACACUGUCUGGUAAAGAUGGC
((((((((((.((((((((((..(.((.......))..)..))))))))))))))..))))))..

Structure

--      --    C          Uu -g  ua 
  CAUCUU  CCAG ACAGUGUUGG  g  uc  a
  ||||||  |||| ||||||||||  |  ||  u
  GUAGAA  GGUC UGUCACAAUc  c  ag  u
CG      AU    -          cu ga  ug

Annotation confidence Not enough data

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Genome context

DS562962.1: 310108-310172 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-141

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-141-5p

Accession	MIMAT0047006
Description	Cavia porcellus cpo-miR-141-5p mature miRNA
Sequence	1 - CAUCUUCCAGCACAGUGUUGGU - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-141-3p

Accession	MIMAT0047007
Description	Cavia porcellus cpo-miR-141-3p mature miRNA
Sequence	43 - UAACACUGUCUGGUAAAGAUGGC - 65
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344