Stem-loop cpo-mir-145

Accession

MI0038652

Description

Cavia porcellus cpo-mir-145 precursor miRNA

Literature search

2 open access papers mention cpo-mir-145
(3 sentences)

Sequence

GUCCAGUUUUCCCAGGAAUCCCUuggaugcuaagauggGGAUUCCUGGAAAUACUGUUCUU
...((((.((.((((((((((((.............)))))))))))).)).)))).....

Structure

--GUC    U  C            uggau 
     CAGU UU CCAGGAAUCCCU     g
     |||| || ||||||||||||     c
     GUCA AA GGUCCUUAGGgg     u
UUCUU    U  A            uagaa 

Annotation confidence Not enough data

Genome context

DS562861.1: 11377829-11377889 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-145

Mature cpo-miR-145-5p

• Accession: MIMAT0047014
• Description: Cavia porcellus cpo-miR-145-5p mature miRNA
• Sequence: 1 - GUCCAGUUUUCCCAGGAAUCCCU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-145-3p

• Accession: MIMAT0047015
• Description: Cavia porcellus cpo-miR-145-3p mature miRNA
• Sequence: 39 - GGAUUCCUGGAAAUACUGUUCUU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344