Stem-loop cpo-mir-146b

Accession

MI0038654

Description

Cavia porcellus cpo-mir-146b precursor miRNA

Sequence

UAAGAACUGAAUUCUGUAGGCUGugagcuccagcaaauGCCUUAGGGACUCAGUUCUGGA
..((((((((.((((..((((.((..((....))..))))))..)))).))))))))...

Structure

-UA        A    GU    U  ga  u 
   AGAACUGA UUCU  AGGC Gu  gc c
   |||||||| ||||  |||| ||  ||  
   UCUUGACU AGGG  UCCG ua  cg c
AGG        C    AU    -  aa  a 

Annotation confidence Not enough data

Genome context

DS562866.1: 12137383-12137442 [-]

Mature cpo-miR-146b-5p

• Accession: MIMAT0047018
• Description: Cavia porcellus cpo-miR-146b-5p mature miRNA
• Sequence: 1 - UAAGAACUGAAUUCUGUAGGCUG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-146b-3p

• Accession: MIMAT0047019
• Description: Cavia porcellus cpo-miR-146b-3p mature miRNA
• Sequence: 39 - GCCUUAGGGACUCAGUUCUGGA - 60
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344