miRBase entry: cpo-mir-183

Stem-loop cpo-mir-183

Accession

MI0038671

Description

Cavia porcellus cpo-mir-183 precursor miRNA

Sequence

UAUGGCACUGGUAGAAUUCACUgugaacagucucagucagUGAAUUACCGAAGGGCCAUAAA
((((((.((((((..(((((((((((......)))..))))))))))))..)).))))))..

Structure

--      A  --    GA        --   ac 
  UAUGGC CU  GGUA  AUUCACUg  uga  a
  |||||| ||  ||||  ||||||||  |||   
  AUACCG GA  CCAU  UAAGUgac  acu  g
AA      G  AG    --        ug   cu

Annotation confidence Not enough data

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Genome context

DS562866.1: 50142394-50142455 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-183

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-183-5p

Accession	MIMAT0047050
Description	Cavia porcellus cpo-miR-183-5p mature miRNA
Sequence	1 - UAUGGCACUGGUAGAAUUCACU - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-183-3p

Accession	MIMAT0047051
Description	Cavia porcellus cpo-miR-183-3p mature miRNA
Sequence	41 - UGAAUUACCGAAGGGCCAUAAA - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344