Stem-loop cpo-mir-191

Accession

MI0038679

Description

Cavia porcellus cpo-mir-191 precursor miRNA

Literature search

1 open access papers mention cpo-mir-191
(1 sentences)

Sequence

133904 reads, 19929.0 reads per million, 9 experiments

CAACGGAAUCCCAAAAGCAGCUGUugucuugagagcauuccaGCUGCGCUUGGAUUUCGUUCCC
.((((((((((.((..(((((((.(((.......)))...)))))))..))))))))))))...

Structure

--C          C  AA       --U   cu 
   AACGGAAUCC AA  GCAGCUG   ugu  u
   |||||||||| ||  |||||||   |||  g
   UUGCUUUAGG UU  CGUCGac   acg  a
CCC          -  CG       cuu   ag 

Annotation confidence High

Genome context

DS562863.1: 24185925-24185988 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-191

Mature cpo-miR-191-5p

• Accession: MIMAT0047066
• Description: Cavia porcellus cpo-miR-191-5p mature miRNA
• Sequence: 1 - CAACGGAAUCCCAAAAGCAGCUGU - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-191-3p

• Accession: MIMAT0047067
• Description: Cavia porcellus cpo-miR-191-3p mature miRNA
• Sequence: 43 - GCUGCGCUUGGAUUUCGUUCCC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344