Stem-loop cpo-mir-196c

Accession

MI0038686

Description

Cavia porcellus cpo-mir-196c precursor miRNA

Sequence

UAGGUAGUUUCAUGUUGUUGGGAuugaguuuugaacUCGGCAACAAGAAACUGCCUGAG
(((((((((((.((((((((((.((........)))))))))))).)))))))))))..

Structure

--           A          A  gag 
  UAGGUAGUUUC UGUUGUUGGG uu   u
  ||||||||||| |||||||||| ||    
  GUCCGUCAAAG ACAACGGCUc aa   u
GA           A          -  guu 

Annotation confidence Not enough data

Genome context

DS562864.1: 45819379-45819437 [-]

Mature cpo-miR-196c-5p

• Accession: MIMAT0047080
• Description: Cavia porcellus cpo-miR-196c-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGGA - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-196c-3p

• Accession: MIMAT0047081
• Description: Cavia porcellus cpo-miR-196c-3p mature miRNA
• Sequence: 37 - UCGGCAACAAGAAACUGCCUGAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344