Stem-loop cpo-mir-199-1

Accession

MI0038689

Description

Cavia porcellus cpo-mir-199-1 precursor miRNA

Sequence

CCCAGUGUUCAGACUACCUGUUCaggcgccucugcauguguACAGUAGUCUGCACAUUGGUUA
.(((((((.((((((((.(((.((.(.((....)).).)).))))))))))).)))))))...

Structure

--C       U        C   U  g c  c 
   CCAGUGU CAGACUAC UGU Ca g gc u
   ||||||| |||||||| ||| || | ||  
   GGUUACA GUCUGAUG ACA gu u cg c
AUU       C        -   u  g a  u 

Annotation confidence Not enough data

Genome context

DS563081.1: 180917-180979 [-]

Mature cpo-miR-199-5p

• Accession: MIMAT0047086
• Description: Cavia porcellus cpo-miR-199-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUUC - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-199-3p

• Accession: MIMAT0047087
• Description: Cavia porcellus cpo-miR-199-3p mature miRNA
• Sequence: 42 - ACAGUAGUCUGCACAUUGGUUA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344