Stem-loop cpo-mir-214

Accession

MI0038705

Description

Cavia porcellus cpo-mir-214 precursor miRNA

Sequence

UGCCUGUCUACACUUGCUGUGCagaacauccgcucaccuguACAGCAGGCACAGACAGGCAGU
(((((((((...((((((((((((.............))))))))))))...)))))))))..

Structure

--         ACA            aacau 
  UGCCUGUCU   CUUGCUGUGCag     c
  |||||||||   ||||||||||||     c
  ACGGACAGA   GGACGACAuguc     g
UG         CAC            cacuc 

Annotation confidence Not enough data

Genome context

DS562867.1: 11468170-11468232 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-214

Mature cpo-miR-214-5p

• Accession: MIMAT0047115
• Description: Cavia porcellus cpo-miR-214-5p mature miRNA
• Sequence: 1 - UGCCUGUCUACACUUGCUGUGC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-214-3p

• Accession: MIMAT0047116
• Description: Cavia porcellus cpo-miR-214-3p mature miRNA
• Sequence: 42 - ACAGCAGGCACAGACAGGCAGU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344