Stem-loop cpo-mir-221

Accession

MI0038713

Description

Cavia porcellus cpo-mir-221 precursor miRNA

Sequence

ACCUGGCAUACAAUGUAGAUUUCUGUguuuguugaacaacAGCUACAUUGUCUGCUGGGUUUC
((((((((.(((((((((....((((((((...)))).))))))))))))).))))))))...

Structure

---        U         AUUU    -    g 
   ACCUGGCA ACAAUGUAG    CUGU guuu  
   |||||||| |||||||||    |||| |||| u
   UGGGUCGU UGUUACAUC    GAca caag  
CUU        C         ----    a    u 

Annotation confidence Not enough data

Genome context

DS562888.1: 12035274-12035336 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-221

Mature cpo-miR-221-5p

• Accession: MIMAT0047130
• Description: Cavia porcellus cpo-miR-221-5p mature miRNA
• Sequence: 1 - ACCUGGCAUACAAUGUAGAUUUCUGU - 26
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-221-3p

• Accession: MIMAT0047131
• Description: Cavia porcellus cpo-miR-221-3p mature miRNA
• Sequence: 41 - AGCUACAUUGUCUGCUGGGUUUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344