miRBase entry: cpo-mir-302a

Stem-loop cpo-mir-302a

Accession

MI0038721

Description

Cavia porcellus cpo-mir-302a precursor miRNA

Sequence

ACUUAAACGUGGACGUACUUGCUuuggaagcgagaaagUAAGUGCUUCCAUGUUUCGGUGAugg
(((.(((((((((.(((((((((((.........))))))))))).))))))))).))).....

Structure

-----   U         C           gga 
     ACU AAACGUGGA GUACUUGCUuu   a
     ||| ||||||||| |||||||||||   g
     UGG UUUGUACCU CGUGAAUgaaa   c
gguAG   C         U           gag

Annotation confidence Not enough data

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Genome context

DS562898.1: 11471972-11472035 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cpo-mir-302a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-302a-5p

Accession	MIMAT0047146
Description	Cavia porcellus cpo-miR-302a-5p mature miRNA
Sequence	1 - ACUUAAACGUGGACGUACUUGCU - 23
Evidence	experimental Illumina [1]

Mature cpo-miR-302a-3p

Accession	MIMAT0047147
Description	Cavia porcellus cpo-miR-302a-3p mature miRNA
Sequence	39 - UAAGUGCUUCCAUGUUUCGGUGA - 61
Evidence	not_experimental

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344