Stem-loop cpo-mir-302a

Accession

MI0038721

Description

Cavia porcellus cpo-mir-302a precursor miRNA

Sequence

ACUUAAACGUGGACGUACUUGCUuuggaagcgagaaagUAAGUGCUUCCAUGUUUCGGUGAugg
(((.(((((((((.(((((((((((.........))))))))))).))))))))).))).....

Structure

-----   U         C           gga 
     ACU AAACGUGGA GUACUUGCUuu   a
     ||| ||||||||| |||||||||||   g
     UGG UUUGUACCU CGUGAAUgaaa   c
gguAG   C         U           gag 

Annotation confidence Not enough data

Genome context

DS562898.1: 11471972-11472035 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cpo-mir-302a

Mature cpo-miR-302a-5p

• Accession: MIMAT0047146
• Description: Cavia porcellus cpo-miR-302a-5p mature miRNA
• Sequence: 1 - ACUUAAACGUGGACGUACUUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-302a-3p

• Accession: MIMAT0047147
• Description: Cavia porcellus cpo-miR-302a-3p mature miRNA
• Sequence: 39 - UAAGUGCUUCCAUGUUUCGGUGA - 61
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344