miRBase entry: cpo-mir-329

Stem-loop cpo-mir-329

Accession

MI0038730

Description

Cavia porcellus cpo-mir-329 precursor miRNA

Sequence

AGAGGUUUUCUGGGUUUCUGUUUCuuuaaugaggaugaAACACACCUAGUCAACCUCUUU
(((((((..((((((...((((((.((......)).)))))).))))))..)))))))..

Structure

--       UU      UUC      u  aa 
  AGAGGUU  CUGGGU   UGUUUC uu  u
  |||||||  ||||||   |||||| ||   
  UCUCCAA  GAUCCA   ACAAag ag  g
UU       CU      --C      u  ga

Annotation confidence Not enough data

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Genome context

DS562966.1: 1086616-1086675 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cpo-mir-329

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-329-5p

Accession	MIMAT0047164
Description	Cavia porcellus cpo-miR-329-5p mature miRNA
Sequence	1 - AGAGGUUUUCUGGGUUUCUGUUUC - 24
Evidence	experimental Illumina [1]

Mature cpo-miR-329-3p

Accession	MIMAT0047165
Description	Cavia porcellus cpo-miR-329-3p mature miRNA
Sequence	39 - AACACACCUAGUCAACCUCUUU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344