Stem-loop cpo-mir-335

Accession

MI0038733

Description

Cavia porcellus cpo-mir-335 precursor miRNA

Sequence

UCAAGAGCAAUAACGAAAAAUGuuugucauaaaccgUUUUUCAUUAUUGCUCCUGACC
(((.(((((((((.((((((((.((......)).)))))))).))))))))).)))..

Structure

--   A         C        u  gu 
  UCA GAGCAAUAA GAAAAAUG uu  c
  ||| ||||||||| |||||||| ||   
  AGU CUCGUUAUU CUUUUUgc aa  a
CC   C         A        c  au 

Annotation confidence Not enough data

Genome context

DS562866.1: 50759609-50759666 [+]

Mature cpo-miR-335-5p

• Accession: MIMAT0047170
• Description: Cavia porcellus cpo-miR-335-5p mature miRNA
• Sequence: 1 - UCAAGAGCAAUAACGAAAAAUG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-335-3p

• Accession: MIMAT0047171
• Description: Cavia porcellus cpo-miR-335-3p mature miRNA
• Sequence: 37 - UUUUUCAUUAUUGCUCCUGACC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344