miRBase entry: cpo-mir-362

Stem-loop cpo-mir-362

Accession

MI0038743

Description

Cavia porcellus cpo-mir-362 precursor miRNA

Sequence

AAUCCUUGGGAACCUAGGUGUGAGUGcugcuucagugcAACACACCUAUUCAAGGAUUCA
((((((((((....((((((((.((((((...))))))..))))))))))))))))))..

Structure

--          AACC        -A      c 
  AAUCCUUGGG    UAGGUGUG  GUGcug  
  ||||||||||    ||||||||  |||||| u
  UUAGGAACUU    AUCCACAC  cgugac  
AC          ----        AA      u

Annotation confidence Not enough data

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Genome context

DS562987.1: 3009085-3009144 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cpo-mir-362

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-362-5p

Accession	MIMAT0047190
Description	Cavia porcellus cpo-miR-362-5p mature miRNA
Sequence	1 - AAUCCUUGGGAACCUAGGUGUGAGUG - 26
Evidence	experimental Illumina [1]

Mature cpo-miR-362-3p

Accession	MIMAT0047191
Description	Cavia porcellus cpo-miR-362-3p mature miRNA
Sequence	39 - AACACACCUAUUCAAGGAUUCA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344