Stem-loop cpo-mir-370

Accession

MI0038749

Description

Cavia porcellus cpo-mir-370 precursor miRNA

Literature search

1 open access papers mention cpo-mir-370
(2 sentences)

Sequence

1622 reads, 60.0 reads per million, 5 experiments

cCAGGUCACGUCUCUGCAGUUACACagcucaugaguGCCUGCUGGGGUGGAACCUGGU
((((((..((((((.((((.(((.((.....)).))).)))).))))))..)))))).

Structure

-      CA      U    U   A  g 
 cCAGGU  CGUCUC GCAG UAC Ca c
 ||||||  |||||| |||| ||| || u
 GGUCCA  GUGGGG CGUC Gug gu c
U      AG      U    C   a  a 

Annotation confidence Medium

Genome context

DS562966.1: 977812-977869 [+]

Mature cpo-miR-370-5p

• Accession: MIMAT0047201
• Description: Cavia porcellus cpo-miR-370-5p mature miRNA
• Sequence: 2 - CAGGUCACGUCUCUGCAGUUACAC - 25
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-370-3p

• Accession: MIMAT0047202
• Description: Cavia porcellus cpo-miR-370-3p mature miRNA
• Sequence: 37 - GCCUGCUGGGGUGGAACCUGGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344