Stem-loop cpo-mir-377

Accession

MI0038757

Description

Cavia porcellus cpo-mir-377 precursor miRNA

Sequence

AGAGGUUGCCCUUGGUGAAUUCgcuuuauguauguugaAUCACACAAAGGCAACUUUUGU
((((((((((.(((((((.(((((.........).)))))))).))).))))))))))..

Structure

--          C   -    A    - uuu 
  AGAGGUUGCC UUG GUGA UUCg c   a
  |||||||||| ||| |||| |||| |   u
  UUUUCAACGG AAC CACU Aagu g   g
UG          A   A    -    u uau 

Annotation confidence Not enough data

Genome context

DS562966.1: 1114436-1114495 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from cpo-mir-377

Mature cpo-miR-377-5p

• Accession: MIMAT0047217
• Description: Cavia porcellus cpo-miR-377-5p mature miRNA
• Sequence: 1 - AGAGGUUGCCCUUGGUGAAUUC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-377-3p

• Accession: MIMAT0047218
• Description: Cavia porcellus cpo-miR-377-3p mature miRNA
• Sequence: 39 - AUCACACAAAGGCAACUUUUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344