Stem-loop cpo-mir-429

Accession

MI0038772

Description

Cavia porcellus cpo-mir-429 precursor miRNA

Sequence

GUCUUACCAGACACGGUUAGAucuggaugcuucugucUAAUACUGUCUGGUAAUGCCGU
((.((((((((((..(((((((..(((....))))))))))..)))))))))).))...

Structure

---  C          CG       cu   u 
   GU UUACCAGACA  GUUAGAu  gga g
   || ||||||||||  |||||||  |||  
   CG AAUGGUCUGU  UAAUcug  ucu c
UGC  U          CA       --   u 

Annotation confidence Not enough data

Genome context

DS563041.1: 1148974-1149032 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-429

Mature cpo-miR-429-5p

• Accession: MIMAT0047247
• Description: Cavia porcellus cpo-miR-429-5p mature miRNA
• Sequence: 1 - GUCUUACCAGACACGGUUAGA - 21
• Evidence: not_experimental

Mature cpo-miR-429-3p

• Accession: MIMAT0047248
• Description: Cavia porcellus cpo-miR-429-3p mature miRNA
• Sequence: 38 - UAAUACUGUCUGGUAAUGCCGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344