Stem-loop cpo-mir-551

Accession

MI0038823

Description

Cavia porcellus cpo-mir-551 precursor miRNA

Sequence

GAAAUCAAGCGUGGGUGAGACCUggugcggaaggggaagGCGACCCAUACUUGGUUUCAG
(((((((((.((((((..(.(((..(.(....).)..)))).)))))).)))))))))..

Structure

--         C      GA A   gg g g 
  GAAAUCAAG GUGGGU  G CCU  u c g
  ||||||||| ||||||  | |||  | |  
  CUUUGGUUC UACCCA  C Gga  g g a
GA         A      -G -   ag g a 

Annotation confidence Not enough data

Genome context

DS562955.1: 1116239-1116298 [+]

Mature cpo-miR-551-5p

• Accession: MIMAT0047347
• Description: Cavia porcellus cpo-miR-551-5p mature miRNA
• Sequence: 1 - GAAAUCAAGCGUGGGUGAGACCU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-551-3p

• Accession: MIMAT0047348
• Description: Cavia porcellus cpo-miR-551-3p mature miRNA
• Sequence: 40 - GCGACCCAUACUUGGUUUCAG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344