miRBase entry: cpo-mir-660

Stem-loop cpo-mir-660

Accession

MI0038832

Description

Cavia porcellus cpo-mir-660 precursor miRNA

Sequence

UACCCAUUGCAUAUCGGAGUUGUgaauucuuaaaauAUCUCCUGUAUGCAUGGAUUAUA
...((((.((((((.((((.(((...........))).)))).))))))))))......

Structure

---UAC    U      C    U   gaau 
      CCAU GCAUAU GGAG UGU    u
      |||| |||||| |||| |||    c
      GGUA CGUAUG CCUC Aua    u
AUAUUA    -      U    U   aaau

Annotation confidence Not enough data

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Genome context

DS562987.1: 3012570-3012628 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cpo-mir-660

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-660-5p

Accession	MIMAT0047365
Description	Cavia porcellus cpo-miR-660-5p mature miRNA
Sequence	1 - UACCCAUUGCAUAUCGGAGUUGU - 23
Evidence	experimental Illumina [1]

Mature cpo-miR-660-3p

Accession	MIMAT0047366
Description	Cavia porcellus cpo-miR-660-3p mature miRNA
Sequence	37 - AUCUCCUGUAUGCAUGGAUUAUA - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344