miRBase entry: cpo-mir-1185

Stem-loop cpo-mir-1185

Accession

MI0038849

Description

Cavia porcellus cpo-mir-1185 precursor miRNA

Sequence

AGAGGAUACCCUUUGUAUGUUCacuuuauaaauggugaAUAUACAGGGGGAGACUCUUAU
((((..(.(((((((((((((((((........))))))))))))))))))..))))...

Structure

---    GA A                 uua 
   AGAG  U CCCUUUGUAUGUUCacu   u
   ||||  | |||||||||||||||||    
   UCUC  A GGGGGACAUAUAagugg   a
UAU    AG -                 uaa

Annotation confidence Not enough data

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Genome context

DS562966.1: 1097764-1097823 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from cpo-mir-1185

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cpo-miR-1185-5p

Accession	MIMAT0047399
Description	Cavia porcellus cpo-miR-1185-5p mature miRNA
Sequence	1 - AGAGGAUACCCUUUGUAUGUUC - 22
Evidence	experimental Illumina [1]

Mature cpo-miR-1185-3p

Accession	MIMAT0047400
Description	Cavia porcellus cpo-miR-1185-3p mature miRNA
Sequence	39 - AUAUACAGGGGGAGACUCUUAU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344