Stem-loop cpo-mir-1842

Accession

MI0038863

Description

Cavia porcellus cpo-mir-1842 precursor miRNA

Sequence

UUGGCUCUGCGAGGUCGGCUCAaggugggucuugauauugAGCAGGCCUGUCAGGGCGUUG
...((((((..(((((.((((((.((........)).)))))).)))))..))))))....

Structure

-UUG      CG     G      g  ggg 
    GCUCUG  AGGUC GCUCAa gu   u
    ||||||  ||||| |||||| ||    
    CGGGAC  UCCGG CGAguu ua   c
GUUG      UG     A      a  guu 

Annotation confidence Not enough data

Genome context

DS562859.1: 22299160-22299220 [-]

Mature cpo-miR-1842-5p

• Accession: MIMAT0047427
• Description: Cavia porcellus cpo-miR-1842-5p mature miRNA
• Sequence: 1 - UUGGCUCUGCGAGGUCGGCUCA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1842-3p

• Accession: MIMAT0047428
• Description: Cavia porcellus cpo-miR-1842-3p mature miRNA
• Sequence: 41 - AGCAGGCCUGUCAGGGCGUUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344