Stem-loop cpo-mir-2355

Accession

MI0038864

Description

Cavia porcellus cpo-mir-2355 precursor miRNA

Sequence

GUCCUCAGAUACAAUGGACAAUaugcuauuauaauugcacggcauUGUCCUUGCUGUUUGGAGAUAA
(((.((((((((((.(((((..(((((.............))))))))))))).))))))).)))..

Structure

--   C       -   U     AU     auuau 
  GUC UCAGAUA CAA GGACA  augcu     a
  ||| ||||||| ||| |||||  |||||     a
  UAG GGUUUGU GUU CCUGU  uacgg     u
AA   A       C   -     --     cacgu 

Annotation confidence Not enough data

Genome context

DS562868.1: 40713701-40713767 [-]

Mature cpo-miR-2355-5p

• Accession: MIMAT0047429
• Description: Cavia porcellus cpo-miR-2355-5p mature miRNA
• Sequence: 1 - GUCCUCAGAUACAAUGGACAAU - 22
• Evidence: not_experimental

Mature cpo-miR-2355-3p

• Accession: MIMAT0047430
• Description: Cavia porcellus cpo-miR-2355-3p mature miRNA
• Sequence: 46 - UGUCCUUGCUGUUUGGAGAUAA - 67
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344