Stem-loop cpo-mir-12076

Accession

MI0038876

Description

Cavia porcellus cpo-mir-12076 precursor miRNA

Sequence

188 reads, 29.0 reads per million, 1 experiments

CCUGGCCCGGCAGUGUUUGGCUcugucugugugaaccUCAAGCUCUGCCUGACCAGAGGG
.((((.(.(((((.((((((.....((.....))...)))))).))))).).))))....

Structure

---C    C C     U      CUcug  u 
    CUGG C GGCAG GUUUGG     uc g
    |||| | ||||| ||||||     || u
    GACC G CCGUC CGAACU     ag g
GGGA    A U     U      --cca  u 

Annotation confidence High

Genome context

DS562858.1: 1597129-1597188 [+]

Mature cpo-miR-12076-5p

• Accession: MIMAT0047453
• Description: Cavia porcellus cpo-miR-12076-5p mature miRNA
• Sequence: 1 - CCUGGCCCGGCAGUGUUUGGCU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-12076-3p

• Accession: MIMAT0047454
• Description: Cavia porcellus cpo-miR-12076-3p mature miRNA
• Sequence: 38 - UCAAGCUCUGCCUGACCAGAGGG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344