Stem-loop cpo-mir-12078

Accession

MI0038878

Description

Cavia porcellus cpo-mir-12078 precursor miRNA

Sequence

AGGUGGAACUCUUGAUAGUCUgcucacuuucacuauagcucagACUAUCAGAGUCUCCAUUCCUGU
((((((((((((.(((((((((....((........))..)))))))))))))).))))..)))..

Structure

--   --    -     U         cuca  uuc 
  AGG  UGGA ACUCU GAUAGUCUg    cu   a
  |||  |||| ||||| |||||||||    ||    
  UCC  ACCU UGAGA CUAUCAgac    ga   c
UG   UU    C     -         --uc  uau 

Annotation confidence Not enough data

Genome context

DS562896.1: 4308585-4308650 [+]

Mature cpo-miR-12078-5p

• Accession: MIMAT0047457
• Description: Cavia porcellus cpo-miR-12078-5p mature miRNA
• Sequence: 1 - AGGUGGAACUCUUGAUAGUCU - 21
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-12078-3p

• Accession: MIMAT0047458
• Description: Cavia porcellus cpo-miR-12078-3p mature miRNA
• Sequence: 44 - ACUAUCAGAGUCUCCAUUCCUGU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344