miRBase entry: dno-mir-17

Stem-loop dno-mir-17

Accession

MI0038909

Description

Dasypus novemcinctus dno-mir-17 precursor miRNA

Sequence

CAAAGUGCUUACAGUGCAGGUAGugauaugugcaucuACUGCAGUGAAGGCACUUGUAG
..((((((((.((.(((((.(((((.......)).)))))))).)).))))))))....

Structure

--CA        A  G     G   -  au 
    AAGUGCUU CA UGCAG UAG ug  a
    |||||||| || ||||| ||| ||  u
    UUCACGGA GU ACGUC Auc ac  g
GAUG        A  G     -   u  gu

Annotation confidence Not enough data

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Genome context

JH570327.1: 92325-92383 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from dno-mir-17

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-17-5p

Accession	MIMAT0047509
Description	Dasypus novemcinctus dno-miR-17-5p mature miRNA
Sequence	1 - CAAAGUGCUUACAGUGCAGGUAG - 23
Evidence	experimental Illumina [1]

Mature dno-miR-17-3p

Accession	MIMAT0047510
Description	Dasypus novemcinctus dno-miR-17-3p mature miRNA
Sequence	38 - ACUGCAGUGAAGGCACUUGUAG - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344