miRBase entry: dno-mir-27b

Stem-loop dno-mir-27b

Accession

MI0038928

Description

Dasypus novemcinctus dno-mir-27b precursor miRNA

Sequence

AGAGCUUAGCUGAUUGGUGAACAgugauugguuuccaccuugUUCACAGUGGCUAAGUUCUGC
(((((((((((.((((.(((((((.(..(((...)))).))))))))))))))))))))))..

Structure

--           G    G       u au   u 
  AGAGCUUAGCU AUUG UGAACAg g  ugg  
  ||||||||||| |||| ||||||| |  ||| u
  UCUUGAAUCGG UGAC ACUUguu c  acc  
CG           -    -       c --   u

Annotation confidence Not enough data

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Genome context

JH570415.1: 2090250-2090312 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dno-mir-27b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-27b-5p

Accession	MIMAT0047545
Description	Dasypus novemcinctus dno-miR-27b-5p mature miRNA
Sequence	1 - AGAGCUUAGCUGAUUGGUGAACA - 23
Evidence	experimental Illumina [1]

Mature dno-miR-27b-3p

Accession	MIMAT0047546
Description	Dasypus novemcinctus dno-miR-27b-3p mature miRNA
Sequence	43 - UUCACAGUGGCUAAGUUCUGC - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344