miRBase entry: dno-mir-29b-1

Stem-loop dno-mir-29b-1

Accession

MI0038931

Description

Dasypus novemcinctus dno-mir-29b-1 precursor miRNA

Sequence

GCUGGUUUCAUAUGGUGGUUUAGAuuuaaauagugauugucUAGCACCAUUUGAAAUCAGUGUU
((((((((((.((((((..((((((.............)))))))))))).))))))))))...

Structure

---          U      GU      uuaaa 
   GCUGGUUUCA AUGGUG  UUAGAu     u
   |||||||||| ||||||  ||||||     a
   UGACUAAAGU UACCAC  GAUcug     g
UUG          U      --      uuagu

Annotation confidence Not enough data

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Genome context

JH569928.1: 229489-229552 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-29b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-29b-5p

Accession	MIMAT0047551
Description	Dasypus novemcinctus dno-miR-29b-5p mature miRNA
Sequence	1 - GCUGGUUUCAUAUGGUGGUUUAGA - 24
Evidence	not_experimental

Mature dno-miR-29b-3p

Accession	MIMAT0047552
Description	Dasypus novemcinctus dno-miR-29b-3p mature miRNA
Sequence	42 - UAGCACCAUUUGAAAUCAGUGUU - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344