miRBase entry: dno-mir-30c-1

Stem-loop dno-mir-30c-1

Accession

MI0038936

Description

Dasypus novemcinctus dno-mir-30c-1 precursor miRNA

Sequence

UGUAAACAUCCUACACUCUCAGCUgugagcucaagguggCUGGGAGAGGGUUGUUUACUCC
.(((((((.(((...(((((((((....(((...)))))))))))).))).)))))))...

Structure

--U       U   ACA         guga   c 
   GUAAACA CCU   CUCUCAGCU    gcu  
   ||||||| |||   |||||||||    ||| a
   CAUUUGU GGG   GAGGGUCgg    ugg  
CCU       U   --A         ----   a

Annotation confidence Not enough data

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Genome context

JH563817.1: 1498919-1498979 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-30c-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-30c-5p

Accession	MIMAT0047560
Description	Dasypus novemcinctus dno-miR-30c-5p mature miRNA
Sequence	1 - UGUAAACAUCCUACACUCUCAGCU - 24
Evidence	experimental Illumina [1]

Mature dno-miR-30c-3p

Accession	MIMAT0047561
Description	Dasypus novemcinctus dno-miR-30c-3p mature miRNA
Sequence	40 - CUGGGAGAGGGUUGUUUACUCC - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344