miRBase entry: dno-mir-133a-1

Stem-loop dno-mir-133a-1

Accession

MI0038977

Description

Dasypus novemcinctus dno-mir-133a-1 precursor miRNA

Sequence

GCUGGUAAAAUGGAACCAAAUCagcuguuggauggaUUUGGUCCCCUUCAACCAGCUGU
((((((..((.((.((((((((..(....)....)))))))).)).))..))))))...

Structure

---      AA  U  A        --ag u 
   GCUGGU  AA GG ACCAAAUC    c g
   ||||||  || || ||||||||    |  
   CGACCA  UU CC UGGUUUag    g u
UGU      AC  C  C        guag u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH567234.1: 201888-201946 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-133a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-133a-5p

Accession	MIMAT0047633
Description	Dasypus novemcinctus dno-miR-133a-5p mature miRNA
Sequence	1 - GCUGGUAAAAUGGAACCAAAUC - 22
Evidence	experimental Illumina [1]

Mature dno-miR-133a-3p

Accession	MIMAT0047634
Description	Dasypus novemcinctus dno-miR-133a-3p mature miRNA
Sequence	37 - UUUGGUCCCCUUCAACCAGCUGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344