miRBase entry: dno-mir-133b

Stem-loop dno-mir-133b

Accession

MI0038979

Description

Dasypus novemcinctus dno-mir-133b precursor miRNA

Sequence

GCUGGUCAAACGGAACCAAGUCcgucuucuugagaggUUUGGUCCCCUUCAACCAGCUA
((((((..((.((.((((((.((.((((...)))))))))))).)).))..))))))..

Structure

--      CA  C  A      U  g    c 
  GCUGGU  AA GG ACCAAG Cc ucuu  
  ||||||  || || |||||| || |||| u
  CGACCA  UU CC UGGUUU gg agag  
AU      AC  C  C      -  -    u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

JH569061.1: 724912-724970 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dno-mir-133b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-133b-5p

Accession	MIMAT0047635
Description	Dasypus novemcinctus dno-miR-133b-5p mature miRNA
Sequence	1 - GCUGGUCAAACGGAACCAAGUC - 22
Evidence	experimental Illumina [1]

Mature dno-miR-133b-3p

Accession	MIMAT0047636
Description	Dasypus novemcinctus dno-miR-133b-3p mature miRNA
Sequence	38 - UUUGGUCCCCUUCAACCAGCUA - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344