Stem-loop dno-mir-134

Accession

MI0038980

Description

Dasypus novemcinctus dno-mir-134 precursor miRNA

Literature search

1 open access papers mention dno-mir-134
(1 sentences)

Sequence

732 reads, 42.0 reads per million, 1 experiments

UGUGACUGGUUGACCAGAGGgcuguauuuucuccaccUGUGGGCCACCUAGUCACCAG
.((((((((.((.(((.(((...............))).)))..)).))))))))...

Structure

--U        U  -A   G   gcugua 
   GUGACUGG UG  CCA AGG      u
   |||||||| ||  ||| |||      u
   CACUGAUC AC  GGU Ucc      u
GAC        C  CG   G   accucu 

Annotation confidence High

Genome context

JH578221.1: 155648-155705 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from dno-mir-134

Mature dno-miR-134-5p

• Accession: MIMAT0047637
• Description: Dasypus novemcinctus dno-miR-134-5p mature miRNA
• Sequence: 1 - UGUGACUGGUUGACCAGAGG - 20
• Evidence: experimental ; Illumina [1]

Mature dno-miR-134-3p

• Accession: MIMAT0047638
• Description: Dasypus novemcinctus dno-miR-134-3p mature miRNA
• Sequence: 38 - UGUGGGCCACCUAGUCACCAG - 58
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344