miRBase entry: dno-mir-154b

Stem-loop dno-mir-154b

Accession

MI0039005

Description

Dasypus novemcinctus dno-mir-154b precursor miRNA

Sequence

AGAGGUCUUCCAUGAUGCAUUCGcuuuauuuuuugacgAAUCAUACAUGGUUGACCUUUUU
.((((((..((((((((.((((((..........).)))))))).)))))..))))))...

Structure

--A      UU     -   C     - uuua 
   GAGGUC  CCAUG AUG AUUCG c    u
   ||||||  ||||| ||| ||||| |     
   UUCCAG  GGUAC UAC UAAgc g    u
UUU      UU     A   -     a uuuu

Annotation confidence Not enough data

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Genome context

JH578221.1: 160728-160788 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from dno-mir-154b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-154b-5p

Accession	MIMAT0047685
Description	Dasypus novemcinctus dno-miR-154b-5p mature miRNA
Sequence	1 - AGAGGUCUUCCAUGAUGCAUUCG - 23
Evidence	experimental Illumina [1]

Mature dno-miR-154b-3p

Accession	MIMAT0047686
Description	Dasypus novemcinctus dno-miR-154b-3p mature miRNA
Sequence	39 - AAUCAUACAUGGUUGACCUUUUU - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344