Stem-loop dno-mir-188

Accession

MI0039019

Description

Dasypus novemcinctus dno-mir-188 precursor miRNA

Sequence

CAUCCCUUGCAUGGUGGAGGGugagcuuucaggaaacccCUCCCACGUGCAGGGUUUGCA
((..(((((((((..((((((....((....))....))))))..)))))))))..))..

Structure

--  UC         GU      ugag  u 
  CA  CCUUGCAUG  GGAGGG    cu u
  ||  |||||||||  ||||||    ||  
  GU  GGGACGUGC  CCUCcc    gg c
AC  UU         AC      caaa  a 

Annotation confidence Not enough data

Genome context

JH569306.1: 1545145-1545204 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from dno-mir-188

Mature dno-miR-188-5p

• Accession: MIMAT0047711
• Description: Dasypus novemcinctus dno-miR-188-5p mature miRNA
• Sequence: 1 - CAUCCCUUGCAUGGUGGAGGG - 21
• Evidence: experimental ; Illumina [1]

Mature dno-miR-188-3p

• Accession: MIMAT0047712
• Description: Dasypus novemcinctus dno-miR-188-3p mature miRNA
• Sequence: 40 - CUCCCACGUGCAGGGUUUGCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344