miRBase entry: dno-mir-188

Stem-loop dno-mir-188

Accession

MI0039019

Description

Dasypus novemcinctus dno-mir-188 precursor miRNA

Sequence

CAUCCCUUGCAUGGUGGAGGGugagcuuucaggaaacccCUCCCACGUGCAGGGUUUGCA
((..(((((((((..((((((....((....))....))))))..)))))))))..))..

Structure

--  UC         GU      ugag  u 
  CA  CCUUGCAUG  GGAGGG    cu u
  ||  |||||||||  ||||||    ||  
  GU  GGGACGUGC  CCUCcc    gg c
AC  UU         AC      caaa  a

Annotation confidence Not enough data

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Genome context

JH569306.1: 1545145-1545204 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from dno-mir-188

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dno-miR-188-5p

Accession	MIMAT0047711
Description	Dasypus novemcinctus dno-miR-188-5p mature miRNA
Sequence	1 - CAUCCCUUGCAUGGUGGAGGG - 21
Evidence	experimental Illumina [1]

Mature dno-miR-188-3p

Accession	MIMAT0047712
Description	Dasypus novemcinctus dno-miR-188-3p mature miRNA
Sequence	40 - CUCCCACGUGCAGGGUUUGCA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344